BLASTP 2.2.5 [Nov-16-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ci0100152192
(165 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
1,798,171 sequences; 593,787,773 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13516889|dbj|BAB40596.1| Ci-META1 [Ciona intestinalis] 155 2e-37
gi|14331021|emb|CAC40991.1| Oikosin1 protein [Oikopleura di... 55 5e-07
gi|21703182|gb|AAM76088.1| mucin-like protein 1 [Boltenia v... 52 4e-06
gi|34877832|ref|XP_224741.2| similar to cartilage intermedi... 49 5e-05
gi|23272761|gb|AAH35776.1| Cartilage intermediate layer pro... 49 5e-05
gi|37182926|gb|AAQ89263.1| CILP [Homo sapiens] 49 5e-05
gi|27734196|ref|NP_775561.1| cartilage intermediate layer p... 48 6e-05
gi|4502845|ref|NP_003604.1| cartilage intermediate layer pr... 48 6e-05
gi|38089660|ref|XP_146393.3| RIKEN cDNA 1110031K21 [Mus mus... 48 8e-05
gi|45946892|gb|AAH68256.1| Unknown (protein for IMAGE:52956... 47 1e-04
gi|23510285|ref|NP_694953.1| cartilage intermediate layer p... 47 1e-04
gi|34864687|ref|XP_236348.2| similar to cartilage intermedi... 46 2e-04
gi|21703184|gb|AAM76089.1| mucin-like protein 2 [Boltenia v... 45 7e-04
gi|6685453|sp|Q25464|FP2_MYTGA Adhesive plaque matrix prote... 44 9e-04
>gi|13516889|dbj|BAB40596.1| Ci-META1 [Ciona intestinalis]
Length = 937
Score = 155 bits (393), Expect = 2e-37
Identities = 73/138 (52%), Positives = 89/138 (64%), Gaps = 3/138 (2%)
Query: 1 YNSCYPNPCNRTAFCSYDYAAGGYTCTCRDGYIANGTTCVRPPKCMGLGTSWSPFYNRDF 60
++ C PNPC A C + + CTC GY+ +G CVRPP C G W+ FYNRD
Sbjct: 26 FSPCQPNPCGAYATCRVK-SWFRHECTCNSGYVGDGQVCVRPPTCRR-GYQWTQFYNRDR 83
Query: 61 PTGACDCETFAYARVDYPKTICANPINVDVVDAVTNLDYRVNKQVVTVNTALEKGFTCFN 120
P+G CDCE F+ + YP+ IC N +VDVVDA T LDYRV QVV +NT EKGF+CFN
Sbjct: 84 PSGHCDCENFSLLKAQYPE-ICDNRHSVDVVDATTGLDYRVYGQVVNINTPAEKGFSCFN 142
Query: 121 RDQKNNTFCRDYKIRYCC 138
Q NN CR+YKIR+CC
Sbjct: 143 AAQPNNQRCRNYKIRFCC 160
Score = 46.2 bits (108), Expect = 2e-04
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 17/79 (21%)
Query: 2 NSC--YPNPCNRTAFCSYDYAAGGYTCTCRDGYIANGTTCVRP-----PKCMGLGTSWSP 54
N C +P PC+ A C+ AG + C C +GY +G TCVR P C G
Sbjct: 854 NECARHPAPCHSHAICTD--TAGSFNCRCEEGYSGDGFTCVRDHTPAHPSCRG------- 904
Query: 55 FYNRDFPTG-ACDCETFAY 72
+ NR+ P+ C+C + Y
Sbjct: 905 YCNRNVPSHYDCECRSSCY 923
>gi|14331021|emb|CAC40991.1| Oikosin1 protein [Oikopleura dioica]
Length = 2301
Score = 55.1 bits (131), Expect = 5e-07
Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 14/109 (12%)
Query: 36 GTTCVRPPKCMGLGTSWSPFYNRDFPTGACDCETFA-YARVDYPKTICANPINVDVVDAV 94
G V +C SWS + N D P G D ET A + R+D +C NP V
Sbjct: 790 GWYTVNEGECTDRTMSWSNWLNGDDPAGEGDYETLAKFNRMD----VCGNPTGVQARTRG 845
Query: 95 TNLDYRVNKQVVTVNTALEKGFTCFNRDQKNNTFCRDYKIRYCCSKSTV 143
+ D ++ LE GF C N D+ + C DY++R+CC + V
Sbjct: 846 NDTD--------AIHLNLESGFWCVN-DENTDNGCNDYEVRFCCPRFRV 885
Score = 51.6 bits (122), Expect = 6e-06
Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 12/98 (12%)
Query: 44 KCMGLGTSWSPFYNRDFPTGACDCETFAYARVDYPK-TICANPINVDVVDAVTNLDYRVN 102
+C G W+ + +RD P G D ET R YP+ ++C +P + R
Sbjct: 1617 ECDDEGYEWTQWLDRDDPIGEGDYET----RFSYPQGSVCEDPTAIQA-------QARTA 1665
Query: 103 KQVVTVNTALEKGFTCFNRDQKNNTFCRDYKIRYCCSK 140
+ L GF C N +Q N C D+++RYCC K
Sbjct: 1666 GSTSFCHVDLAYGFWCDNSEQPNGAQCADFEVRYCCPK 1703
Score = 50.4 bits (119), Expect = 1e-05
Identities = 32/94 (34%), Positives = 41/94 (43%), Gaps = 7/94 (7%)
Query: 45 CMGLGTSWSPFYNRDFPTGACDCETFAYARVDYPKTICANPINVDVVDAVTNLDYRVNKQ 104
C G W+ +YN D G D E P C NP+ V D T Y
Sbjct: 1094 CNVKGWEWTSYYNIDTAAGTGDWEILKNLE---PNQACLNPMGAKVRD--TEAGYYGTSD 1148
Query: 105 VVTVNTALEKGFTCFNRDQKNNTFCRDYKIRYCC 138
VT + +LE GF C N +Q + C D++I YCC
Sbjct: 1149 AVT-HLSLE-GFYCLNEEQPSGMPCADFEISYCC 1180
Score = 48.9 bits (115), Expect = 4e-05
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 24/139 (17%)
Query: 12 TAFCSYDYAAGGYTCTCRDGYIANGTTC-----------VRPPKCMGLGTSWSPFYNRDF 60
T+FC D A G + C + NG C ++ C G W+ + +RD
Sbjct: 1668 TSFCHVDLAYGFW---CDNSEQPNGAQCADFEVRYCCPKMKEVSCDAEGYGWTVWLDRDD 1724
Query: 61 PTGACDCETFAYARVDYPKTI-CANPINVDVVDAVTNLDYRVNKQVVTVNTALEKGFTCF 119
P + D E + +P I C +P+ V+ VT D + ++GF C
Sbjct: 1725 PIESGDWEN----KDGFPAYIVCKDPLAVEAA-VVTGSD----GSTAVTHLDNDQGFWCI 1775
Query: 120 NRDQKNNTFCRDYKIRYCC 138
N +Q + C D+++R+CC
Sbjct: 1776 NDEQPRDEVCADFEVRFCC 1794
Score = 47.0 bits (110), Expect = 1e-04
Identities = 41/146 (28%), Positives = 56/146 (38%), Gaps = 19/146 (13%)
Query: 3 SCYPNPCNRTAFCSYDYAAGGYTCTCRDGY-IANGTTCVRPPKCMGL-------GTSWSP 54
SC C AFC G C C GY + +C+ L G W+
Sbjct: 555 SCNDVECVENAFCVM--TGWGPECMCIPGYNLYEDGSCLNTTTDAVLYDGLCTDGYEWAD 612
Query: 55 FYNRDFPTGACDCETFAYARVDYPKTICANPINVDVVDAVTNLDYRVNKQVVTVNTALEK 114
+ N D P D ET A + C NP V+ V + D + + + E
Sbjct: 613 WLNMDDPQNDGDWETLRMADMTQA---CINPKAVEA-QRVDSAD----TTPMVAHISREL 664
Query: 115 GFTCFNRDQKNNTFCRDYKIRYCCSK 140
GF C N +Q C DY++R+CC K
Sbjct: 665 GFWCINNEQAGG-LCVDYEVRFCCEK 689
Score = 46.2 bits (108), Expect = 2e-04
Identities = 33/114 (28%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 26 CTCRDGYIANGTTCVRPPKCMGLGTSWSPFYNRDFP-TGACDCETFAYARVDYPKTICAN 84
C + G ANG CM G W+P+ N D P +G D ET + +C+N
Sbjct: 1514 CCPKWGASANGDD-----HCMLKGYEWTPWMNEDSPLSGTGDWETI---QSQTELKVCSN 1565
Query: 85 PINVDVVDAVTNLDYRVNKQVVTVNTALEKGFTCFNRDQKNNTFCRDYKIRYCC 138
P + A + V E GF C N ++N+ C D+++R+CC
Sbjct: 1566 PTAIQAFPAGAGATQNTHIDV-------EIGFWCLN--EENSADCADFEVRWCC 1610
Score = 44.7 bits (104), Expect = 7e-04
Identities = 41/133 (30%), Positives = 55/133 (41%), Gaps = 25/133 (18%)
Query: 18 DYAAGG-YTCT------CRDGYIANGTTCVRPPKCMGLGTSWSPFYNRDFPTGACDCETF 70
D AAGG Y C C + + G +C G WS + N D TGA D ET
Sbjct: 977 DTAAGGKYKCVDMEIRFCCEQSLVYG-------ECDQDGYEWSDWLNDDDATGAGDYETL 1029
Query: 71 AYARVDYPKTICANPINVDVVDAVTNLDYRVNKQVVTVNTALEKGFTCFNRDQKNNTFCR 130
+ K CA PI A+ + T+ GF C N D+++ C
Sbjct: 1030 SKFS---GKEACAAPIAAQA-QAIDDGSVEYTHIDTTI------GFYCLN-DEQSTGQCA 1078
Query: 131 DYKIRYCCSKSTV 143
D+++RYCC K V
Sbjct: 1079 DFEVRYCCPKMQV 1091
>gi|21703182|gb|AAM76088.1| mucin-like protein 1 [Boltenia villosa]
Length = 110
Score = 52.0 bits (123), Expect = 4e-06
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 49 GTSWSPFYNRDFPTGACDCETFAYARVDYPKTICANPINVDVVDAVTN-LDYRVNKQVVT 107
G W+ +++RD PTG D E R + +C NP +D +TN L Y + ++T
Sbjct: 18 GNMWTQWFDRDDPTGVGDWEILTEIRKN--ACVCENPTAIDA--RLTNGLRYSLGGDIIT 73
Query: 108 VNTALEKGFTCFNRDQKNNTFCRDYKIRYCCSK 140
++ E G C N Q + C DYK+R+CC +
Sbjct: 74 LSK--EVGLICKNELQVDGR-CADYKVRFCCPR 103
>gi|34877832|ref|XP_224741.2| similar to cartilage intermediate layer protein-like protein 2
[Rattus norvegicus]
Length = 1505
Score = 48.5 bits (114), Expect = 5e-05
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 50 TSWSPFYNRDFPTGACDCETFAYARVDY-PKTICANPINVDVVDAVTNLDYRVNKQVVTV 108
+ W+ ++N D P G D E+ A R Y P +C P+ ++ L + ++V
Sbjct: 400 SEWTSWFNVDHPGGDGDFESLAAIRFYYGPARVCPRPLALEARTTDWALPAAIGERV--- 456
Query: 109 NTALEKGFTCFNRDQKNNTFCRDYKIRYCC 138
+ E+GF C NR+Q C +Y +R+ C
Sbjct: 457 HANPERGFWCLNREQPRGRRCSNYHVRFRC 486
>gi|23272761|gb|AAH35776.1| Cartilage intermediate layer protein [Homo sapiens]
Length = 1184
Score = 48.5 bits (114), Expect = 5e-05
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 3/104 (2%)
Query: 35 NGTTCVRPPKCMGLGTSWSPFYNRDFPTGACDCETFAYARVDYPKTICANPINVDVVDAV 94
N + +P + W+ ++N D+P G D E R Y +CA P+ ++A
Sbjct: 39 NPSIFAKPADTLESPGEWTTWFNIDYPGGKGDYERLDAIRFYYGDRVCARPLR---LEAR 95
Query: 95 TNLDYRVNKQVVTVNTALEKGFTCFNRDQKNNTFCRDYKIRYCC 138
T V+ + +GF C NR+Q+ C +Y +R+ C
Sbjct: 96 TTDWTPAGSTGQVVHGSPREGFWCLNREQRPGQNCSNYTVRFLC 139
>gi|37182926|gb|AAQ89263.1| CILP [Homo sapiens]
Length = 1184
Score = 48.5 bits (114), Expect = 5e-05
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 3/104 (2%)
Query: 35 NGTTCVRPPKCMGLGTSWSPFYNRDFPTGACDCETFAYARVDYPKTICANPINVDVVDAV 94
N + +P + W+ ++N D+P G D E R Y +CA P+ ++A
Sbjct: 39 NPSIFAKPADTLESPGEWTTWFNIDYPGGKGDYERLDAIRFYYGDRVCARPLR---LEAR 95
Query: 95 TNLDYRVNKQVVTVNTALEKGFTCFNRDQKNNTFCRDYKIRYCC 138
T V+ + +GF C NR+Q+ C +Y +R+ C
Sbjct: 96 TTDWTPAGSTGQVVHGSPREGFWCLNREQRPGQNCSNYTVRFLC 139
>gi|27734196|ref|NP_775561.1| cartilage intermediate layer protein, nucleotide
pyrophosphohydrolase [Mus musculus]
gi|26349225|dbj|BAC38252.1| unnamed protein product [Mus musculus]
Length = 1250
Score = 48.1 bits (113), Expect = 6e-05
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 3/101 (2%)
Query: 38 TCVRPPKCMGLGTSWSPFYNRDFPTGACDCETFAYARVDYPKTICANPINVDVVDAVTNL 97
T +P W+ ++N D P G D E R Y + +CA P+ ++A T
Sbjct: 42 TLAKPADSQESPGEWTTWFNIDHPGGQGDYERLDAIRFYYGERVCARPLR---LEARTTD 98
Query: 98 DYRVNKQVVTVNTALEKGFTCFNRDQKNNTFCRDYKIRYCC 138
V+ + +GF C NR+Q+ C +Y +R+ C
Sbjct: 99 WMPAGSTGQVVHGSPREGFWCLNREQRPGQNCSNYTVRFLC 139
>gi|4502845|ref|NP_003604.1| cartilage intermediate layer protein [Homo sapiens]
gi|7512330|pir||T09484 cartilage intermediate layer protein precursor - human
gi|3513503|gb|AAC33838.1| cartilage intermediate layer protein [Homo sapiens]
gi|4587271|dbj|BAA76692.1| cartilage intermediate layer protein [Homo sapiens]
gi|6513587|gb|AAF14689.1| cartilage intermediate layer protein [Homo sapiens]
Length = 1184
Score = 48.1 bits (113), Expect = 6e-05
Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Query: 35 NGTTCVRPPKCMGLGTSWSPFYNRDFPTGACDCETFAYARVDYPKTICANPINVDVVDAV 94
N + +P + W+ +N D+P G D E R Y +CA P+ ++A
Sbjct: 39 NPSIFAKPADTLESPGEWTTLFNIDYPGGKGDYERLDAIRFYYGDRVCARPLR---LEAR 95
Query: 95 TNLDYRVNKQVVTVNTALEKGFTCFNRDQKNNTFCRDYKIRYCC 138
T V+ + +GF C NR+Q+ C +Y +R+ C
Sbjct: 96 TTDWTPAGSTGQVVHGSPREGFWCLNREQRPGQNCSNYTVRFLC 139
>gi|38089660|ref|XP_146393.3| RIKEN cDNA 1110031K21 [Mus musculus]
Length = 1162
Score = 47.8 bits (112), Expect = 8e-05
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 50 TSWSPFYNRDFPTGACDCETFAYARVDY-PKTICANPINVDVVDAVTNLDYRVNKQVVTV 108
+ W+ ++N D P G D E+ A R Y P +C P+ ++ L + ++V
Sbjct: 57 SEWTSWFNVDHPGGDGDFESLAAIRFYYGPARVCPRPLALEARTTDWALPAAMGERV--- 113
Query: 109 NTALEKGFTCFNRDQKNNTFCRDYKIRYCC 138
+ E+GF C NR+Q C +Y +R+ C
Sbjct: 114 HANPERGFWCLNREQPRGRRCSNYHVRFRC 143
>gi|45946892|gb|AAH68256.1| Unknown (protein for IMAGE:5295699) [Homo sapiens]
Length = 392
Score = 47.0 bits (110), Expect = 1e-04
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 50 TSWSPFYNRDFPTGACDCETFAYARVDY-PKTICANPINVDVVDAVTNLDYRVNKQVVTV 108
+ W+ ++N D P G D E+ A R Y P +C P+ ++ L V ++V
Sbjct: 57 SEWTSWFNVDHPGGDGDFESLAAIRFYYGPARVCPRPLALEARTTDWALPSAVGERVHLN 116
Query: 109 NTALEKGFTCFNRDQKNNTFCRDYKIRYCC 138
T +GF C NR+Q C +Y +R+ C
Sbjct: 117 PT---RGFWCLNREQPRGRRCSNYHVRFRC 143
>gi|23510285|ref|NP_694953.1| cartilage intermediate layer protein 2; cartilage intermediate
layer protein-like protein 2 [Homo sapiens]
gi|23307795|gb|AAN17826.1| cartilage intermediate layer protein-like protein CLIP-2 [Homo
sapiens]
Length = 1156
Score = 47.0 bits (110), Expect = 1e-04
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 50 TSWSPFYNRDFPTGACDCETFAYARVDY-PKTICANPINVDVVDAVTNLDYRVNKQVVTV 108
+ W+ ++N D P G D E+ A R Y P +C P+ ++ L V ++V
Sbjct: 57 SEWTSWFNVDHPGGDGDFESLAAIRFYYGPARVCPRPLALEARTTDWALPSAVGERVHLN 116
Query: 109 NTALEKGFTCFNRDQKNNTFCRDYKIRYCC 138
T +GF C NR+Q C +Y +R+ C
Sbjct: 117 PT---RGFWCLNREQPRGRRCSNYHVRFRC 143
>gi|34864687|ref|XP_236348.2| similar to cartilage intermediate layer protein, nucleotide
pyrophosphohydrolase [Rattus norvegicus]
Length = 1267
Score = 46.2 bits (108), Expect = 2e-04
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 52 WSPFYNRDFPTGACDCETFAYARVDYPKTICANPINVDVVDAVTNLDYRVNKQVVTVNTA 111
W+ ++N D P G D E R Y + +CA P+ ++ + + QV V+ +
Sbjct: 56 WTTWFNIDHPGGQGDYERLDAIRFYYGERVCARPLRLE-ARTTDWMPAGITGQV--VHGS 112
Query: 112 LEKGFTCFNRDQKNNTFCRDYKIRYCC 138
+GF C N++Q+ C +Y +R+ C
Sbjct: 113 PREGFWCLNKEQRPGQNCSNYTVRFLC 139
>gi|21703184|gb|AAM76089.1| mucin-like protein 2 [Boltenia villosa]
Length = 127
Score = 44.7 bits (104), Expect = 7e-04
Identities = 37/114 (32%), Positives = 55/114 (48%), Gaps = 18/114 (15%)
Query: 35 NGTTC----VR---PPKCMGLGTSWSPFYNRDFPTGACDCETFAYARVDY-PKTICANPI 86
NG TC VR P KC W+ +++ D P+G D ET R Y +C++P
Sbjct: 22 NGNTCNDYRVRFCCPKKCY-----WTNWFDVDNPSGTGDYETIHNIRKKYGDHKVCSHPS 76
Query: 87 NVDVVDAVTNLDYRVNKQVVTVNTALEKGFTCFNRDQK-NNTFCRDYKIR-YCC 138
++ V Y+ + V++V+ E G C N +Q C+DYK+R YCC
Sbjct: 77 KIET-GLVRAGYYKYVRNVLSVSK--EVGLICKNNEQPYGKPPCQDYKVRFYCC 127
>gi|6685453|sp|Q25464|FP2_MYTGA Adhesive plaque matrix protein 2 precursor (Foot protein 2) (MGFP2)
(MGFP-2)
gi|1085619|pir||A56175 adhesive plaque protein Mgfp2 precursor - Mediterranean mussel
gi|602768|dbj|BAA07852.1| adhesive plaque matrix protein precursor [Mytilus
galloprovincialis]
Length = 473
Score = 44.3 bits (103), Expect = 9e-04
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 9/58 (15%)
Query: 4 CYPNPCNRTAFCSYDYAAGGYTCTCRDGY--------IANGTTCVRPPKCMGLGTSWS 53
C PNPC CS D +GGY C C+ GY + T C +C+ G+S++
Sbjct: 233 CAPNPCKNGGICSSD-GSGGYRCRCKGGYSGPTCKVNVCKPTPCKNSGRCVNKGSSYN 289
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
Posted date: May 11, 2004 12:59 AM
Number of letters in database: 593,787,773
Number of sequences in database: 1,798,171
Lambda K H
0.327 0.141 0.482
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 216,938,253
Number of Sequences: 1798171
Number of extensions: 9002022
Number of successful extensions: 25738
Number of sequences better than 1.0e-03: 14
Number of HSP's better than 0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 25669
Number of HSP's gapped (non-prelim): 53
length of query: 165
length of database: 593,787,773
effective HSP length: 116
effective length of query: 49
effective length of database: 385,199,937
effective search space: 18874796913
effective search space used: 18874796913
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 103 (44.3 bits)